SelenoDB
Release 1.0

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Selenoprotein annotation

We use the following software, followed by manual curation, to annotate selenoproteins in genome sequences:

Ab initio gene predicton: geneid

Comparative gene prediction (protein alignment): genewise

Comparative gene prediction (protein/mRNA alignment): exonerate

Comparative gene prediction: mRNA alignment: spidey

SECIS prediction: SECISearch

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